BIEB 150-Evolution-Fall 2002

Instructor: Trevor Price 2105 Muir Biology Building. tprice@ucsd.edu

 

T.A.: Melissa Newman. mmnewman@biomail.ucsd.edu

Discussion sections: in WLH 2209. M 2-2.50

in WLH 2114. W 4-4.50; W 5-5.50

Week 3 and Week 8 all Discussion sections will meet in York 1310.

Office Hours: Tues. 4-5, 2105 Muir Biology Building

Text: Futuyma, D. J. 1998. Evolutionary Biology, 3rdedition. Sinauer, Sunderland, MA.

Course structure: Mid-term 30% No make-ups

Final 70%

Week 8 Discussion section-Phylogeny lab exercise-BIEB 150 Fall 2002

Tree that is missing from lab exercise tree.pdf

 

Week 3 Discussion Section-First Lab-Population Genetics

 

Problem set #1 for BIEB 150, Fall 2002

To view the problem set you will need Adobe Acrobat Reader. You can download this free from:

http://www.adobe.com/products/acrobat/readstep2.html

Problem 5ii should read "Given the four grandparents calculate the probability that their grandchild would be (1,5)/(2,5)."

Solutions to problem set 1:Problem Set 1 Answers BIEB 150 2002

 

Last years midterm and final.

evolution_midterm.pdf

evolution_final.pdf

Old final is missing two figures: missing figures.cwk (WP).pdf

 

Handouts from Melissa:

Handout 1- Relates to Week 1 Discussion Section

The next handouts are related to topics people have asked me questions about:

Linkage Disequilibrium

allozymes.pdf

fitness.pdf

mimcry.pdf

Classifying organisms.pdf

Midterm Keywords

Another Handout

Keywords/Outline (since midterm)

 

 

Course web page: http://www.biology.ucsd.edu/classes/bieb150.FA02/

 

"Nothing in biology makes sense except in the light of evolution" T. Dobzhansky (1973)

 

This course is central to many themes discussed in biology, especially population biology. The material presented here concentrates on the roles of natural and sexual selection and genetic drift in the evolution of new characters and species. It has been designed to complement and lead into other courses, without there being too much overlap.

Material covered in ORGANISMIC AND EVOLUTIONARY BIOLOGY (BILD 3) is assumed; it provides the basic introduction to Evolution. Relevant chapters in Futuyma that could be read for refreshment purposes are chs. 3, 4, and parts of 12 and 15

BIODIVERSITY (BIEB 140) describes the patterns produced by evolution, including changes through time as elucidated by the fossil record. It provides an important complement to this course. As far as possible material will not be duplicated between courses. Relevant chapters in Futuyma are chs. 5-8 and 25; they will not be covered here.

Some population genetics was initiated in BILD 3, and will be extended here. POPULATION GENETICS (BIEB 156) provides the mathematical theory of evolution which more-or-less takes up where this course leaves off. Much of chapter 14 in Futuyma is covered in that course, and will not be considered here.

MOLECULAR EVOLUTION (BIEB 154) covers mechanisms of mutation (chapter 10 in Futuyma) as well as chapter 22. They will not be covered here.

Relevant readings from Futuyma are listed below. Some lectures will follow Futuyma closely, but others, where there have been recent advances, will depart from the text quite substantially. In these cases, some key references will be given in class, and also posted on the course website.

 

 

 

 

Date Lecture Topics Section Meeting

 

September 26 Organization of genetic variation. 1. (ch. 9) No meeting

 

October 1 Organization of genetic variation. 2. (ch. 9) Hardy Weinberg

October 3 Genetic drift and Gene flow (pp. 297-307, 314-333) & hypothesis tests

October 8 Human evolution (chapter 26) Drift

(lecture given by Dr. D. Woodruff)

October 10 Natural selection. 1. (ch. 13)

October 15 Natural selection. 2. (pp. 402-408, 424-432) Selection (lab) York 1310

October 17 Sexual selection (pp. 586-594)

 

October 22 Sexual conflict, evolution of sex chromosomes General discussion

(not in Futuyma)

October 24 Phylogeny and classification (chapter 5)

October 29 Sex and senescence (pp. 568, 606-612) Phylogeny

October 31 Co-evolution, evolution of disease (pp. 539-553)

 

November 5 Co-evolution of competitors (pp. 218-220, 554-558) Review

November 7 Adaptive radiation (pp. 117-118, 210-212)

November 12 MID-TERM EXAM [30% of grade] No meeting

November 14 Species (chapter 15)

November 19 Speciation 1. Genetics of speciation (chapter 16) Phylogeny (lab) York 1310

November 21 Speciation 2. Ecology of speciation (chapter 16)

 

November 26 Speciation 3. Speciation in plants (chapter 16) No meeting

November 28 THANKSGIVING DAY

December 3 Development and evolution (pp. 661-674) Review

December 5 Cultural evolution, assimilation (p.441)

 

 

December 10, 8-11am FINAL EXAM [70% of grade]