CLUSTAL X (1.81) multiple sequence alignment


PilZ_Xcac       -MQTGPQS---PAKGYTATELLIVMAVLGLLAAIALPSFSSLIERQRLQTRVHLLTAHLA
Orf3_Xfa        -MPS--------SRGYTLPELLITMALIALLTAIGLPFFKQTLERQRLENKMHLLSSQFA
PilU_Xcac       MFFCR-------ARGFTLVELMTTVAVVAIVAAIGYPSFQGVIRSNRAVTANNEVVGLLN
Orf1_Xfa        -MPDD-------VRGFTMMELMVVVAVVSVLAAMAFPNFRQVIRSNRVSSRTDELISSIA
Orf_Nme         -MCTRK------QQGFTLTELLIVMVIAAVMAMIALPNMSQWIASRRIASHAERIANLLR
FimT_Nme        -MCTRK------QQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAERIANLLR
Orf2_Xfa        -MTQRKLTPHAPAYGFSTVELMVTIAILAILAGLAYPSFMNLINGERLTSSANELVASLQ
FimT_Pae        -MVERS------QRALTLTELLFALVLLGILGSLALPGMAAWLDGNRERSVLHELSASIQ
FimU_Pae        -MSYRS-----NSTGFTLIELLIIVVLLAIMASFAIPNFKQLTERNELQSAAEELNAMLQ
Orf_Asp         -MTKMN--------GFTLIELLVTIAVIAILATIAVPSFNSILNNQKLNASTRELMSKIA
                 :            . :  **:  :.: .::  :. * :      ..       :   : 

PilZ_Xcac       LARSMAIMRRTAVSVCPSAD------GTMCRTDSNWSAGWILFADPANAGQPS--NALSV
Orf3_Xfa        GARLAAITQQTPVSVCPSRG------DNKCRQDSNWSNGWITYRDSSRKPQPT--SSKAI
PilU_Xcac       LARSEALRSGQSGAICGSSN------GTAC--DGSWGGGILAWSDVNTNGALD--GGEPV
Orf1_Xfa        LARSEAVSSTHGGGLCPSAN------GDAC--DGQWSQGWLVWSDANGNSIFD--KGEAV
Orf_Nme         FSRGEAVRLNLPVYICPVQVKKDGTVNNKCD-SGKKGQGMLAFGDKNGNKTYDGDAADVF
FimT_Nme        FSRGEAVRLNLPVYICPVQVKKDGTPNNKCD-SGKKGQGMLAFGDKNGNKGYDNDTEDVL
Orf2_Xfa        LARTEAIRLGSPVTVCRSDD------GITCRTGGPWQRWVTVAKGRNNIIRVN----DAI
FimT_Pae        LGRTHAVAYQRPVTLCPSTD------GRHCG--SDWGEGWLLAEDGGERLLVG----RAL
FimU_Pae        YARSEAVSQRRAISIQALKD-------------KDWGKGLSIGVLASGSIAAPLRKHDGF
Orf_Asp         EARTQAVTLRQTTGVCLSTV-------------SDCASALSITTNQTNRVYIA-----QL
                 .*  *:       :                                            .

PilZ_Xcac       LRVEQHAMTQKL-------------SVMSTAGRPLIRFMPDGRSGGSN---ATIS--LCI
Orf3_Xfa        LYQEQITNNGSL-------------SIISTSGRPRVRFLPDGRNAGSN---ISIR--FCN
PilU_Xcac       LRYWLGNPK----------------LVVQGPSSGLVAFDGRGRRISAADQQITVRPDQCG
Orf1_Xfa        LRYVQGSPQ----------------LFVSVKDPLPIVFDAHGLRRASNDQVVTLRPDDCS
Orf_Nme         LRSVVLN-DTDDSRINYAFNHIAFGSSQPTADRVVWTFNQNGTFGYTKGQHLTSKSSFFY
FimT_Nme        LRSVVLNDDINDKRINYAFNHIAFGQTQPTTDRVVWTFNQNGTFGYTKDQHLTKQSSFFY
Orf2_Xfa        PNVTVQGSP------------------RITRLSDQIVFSPDGLARDVSGALLTAQLSLCM
FimT_Pae        AKKERLLWN----------------------RSNRLRFLPSGQLNIHNG-----RFLLCG
FimU_Pae        RAATLTAKE--------------------KSAVEHLTFTANGTLVPPTERTFAICQNGKT
Orf_Asp         EKNVVAGTG----------------------SATQIAFRVEGIPITTAKFTLTRN-----
                                                     *   *                  

PilZ_Xcac       QSERVADVVINN-----------SGRARSVRYPVMQSCPAPAQT-------
Orf3_Xfa        NDRLFGLIVINN-----------LGRIRSQRILDPKTCSTEQKIKNGLNNT
PilU_Xcac       GQQLMRTLLINA-----------AGQVRS----RKDNCQ------------
Orf1_Xfa        GQPLQRTVTITA-----------TGLAKV----DKGVCQ------------
Orf_Nme         SDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCPRNDRRTVCQYK-
FimT_Nme        SDGYIQIVLTDAKAVSADEKKFRSAVVLINSSGRVEVCPRGDRRTMCQYK-
Orf2_Xfa        PNTRMANNLRFVSIN--------GGSRIRVSPGATAPCTQPNDE-------
FimT_Pae        RHTVAWQLILNR-----------QGRLRTASARENREKRELCRTSG-----
FimU_Pae        DGGRVLSISQAG------------RIQLEPSSKAPQSCY------------
Orf_Asp         GQSRCVEVGITG-----------------DTYYKEGACT------------
                                                                   
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