CLUSTAL X (1.8) multiple sequence alignment


Cmu             ------------------------------------------------------------
Ctr             ------------------------------------------------------------
Cpn             ------------------------------------------------------------
Ath1            MAVFPIGSHFAPPHQLTKRHVIATSSPISISTRLPQNVSFSKVSGVTGSTRLSKHGVLVR
NhaD_Vpa        ------------------------------------------------------------
Vch             ------------------------------------------------------------
Msp             ------------------------------------------------------------
Mde1            ------------------------------------------------------------
Rsp             ------------------------------------------------------------
Mde2            ------------------------------------------------------------
Rpa             ------------------------------------------------------------
                                                                            

Cmu             ------------------------------------------------------------
Ctr             ------------------------------------------------------------
Cpn             ------------------------------------------------------------
Ath1            AEDKIRSSSSPSSLDEPIDEDLMDSSGLCDPLCSVDEPSSSYFEANYQPKTDIIKALAIL
NhaD_Vpa        ------------------------------------------------------------
Vch             ---------------------------------------------MTGRIALLSLTLFSP
Msp             ----------------MPPAWSVVGGSCPTLLLGSKDHIMVNKGVMAIVMVALGTLLGAG
Mde1            ------------------------------------------MKHCIIVIWAGVLFLFPA
Rsp             ------------------------------------------------------------
Mde2            ------------------------------------------------------------
Rpa             ------------------------------------------------------MARRCG
                                                                            

Cmu             -----------MLLEVFMLKFQLCALFLFGYLAIVFEHIVRVNKSAVSLAMGGLMWLVCF
Ctr             -----------------MLKFQLCLLFLFGYLTIVFEHIVRVNKSAVSLAMGGLMWLVCF
Cpn             -----------------MLKLQLCALFLFGYLAIVFEHIVRVNKSAIALAMGGLMWLVCF
Ath1            AAALTGTAAINHSWVAANQDVAMALLFGIGYAGIIFEESLAFNKSGIGLLMAVSLWVVRS
NhaD_Vpa        ------------------VGYIALILFSIAYILVMLEEYLKMRKSKPVLLAAGLIWILIG
Vch             LSLASTPDGQALDFTHSTIGYAALLIFAIAYTLVMLEEYLQLRKSKPVLLAAGLIWAMIG
Msp             ELWASDGTGGHLDLTHTMYGYLAILLFVVAYGLVMTEEYTKLRKSKPVLLAAGLIWVLIA
Mde1            LASAAASSHVALDLTHHWVGFVALAIFVVAYTLVIFEEQLHMRKSKPVLLAAGLIWVLIA
Rsp             ------MRPPMLDLTSHWAGILSLVIFVAAYILVVFEELR---KSKPVMLAAGLIWLLIG
Mde2            ----------------MFVHYLVIALVVLAMLSIVLEEWIHINKAKTTLFFGCTAWVVLF
Rpa             AGRAVRREAAVTPILILGIPLDFILFAATLVGVAIFHRHTLLIALAGLVTVVGYKLAFAG
                                         :        : ..          :        .  

Cmu             SHMP-----HIDHVIMAEEIADMAQVIFFLFAAMAIVELIDAHKGFSIVVRCCNVE--SR
Ctr             SHIP-----HIDHVMMFEEIADMAQVIFFLFAAMAIVELIDAHRGFSIVVRCCNVE--SR
Cpn             SHIP-----MADHMILVEEIADMSQVIFFLFSAMAIVELIDAHKGFSVIVKFCRIQ--SR
Ath1            IGAPS---TEIAVLDLQHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR--KP
NhaD_Vpa        YTFAQHHQQDVAKAALEHNLLEYAELLLFLLVAMTYINAMEERKLFDALQAWMVGKGFGF
Vch             YVYQQTGSTEVARQALEHNLLEYAELLLFLLVAMTYISAMEERRLFDALKAWMINRGFNF
Msp             AAYVSNHIPHVAEKAMRHNILEYAELFLFLLVAMTYINAMEERLVFESLRAWLVRAGYGF
Mde1            FVYSGQSDHHSAEEAIRHNFLEYAELFFFLLVAMTYINAMLERGVFDSLRDWLVLKGFSY
Rsp             LAYAIAGRGEETYELSAHIIEEYGELFLFLLVAITYVNTLEERRGFEVLRAKLVSMGLSY
Mde2            MHAHAGAETAELQESLNENLLEIATLWLFLMATMTFVAYLNARGFVQNVVQRVFPSELSL
Rpa             FKTGVG--LSGLALHMQHEWVTLANLFLLLMGFALLSAHFEKSGIPDEMPALLPDD----
                                 .     . : ::*:        .      . :           

Cmu             SFLLWVLLTLSFFLSAALDNLTSIIIIVSILKRLVKAREDRLLLGAL-CVIGVNAGGAWT
Ctr             SVLLWVLLTLSFFLSAALDNLTSIIIIISILKRLVKAREDRLLLGAL-CVIGVNAGGAWT
Cpn             TLLLWALIGLSFFLSAALDNLTSIIIIISILKRLVKAREDRLLLGAI-CVIAVNAGGAWT
Ath1            KTLLWVVGFVTFFLSSILDNLTSTIVMVSLIRKLVPQSEYRKLLGGV-VVIAANAGGAWT
NhaD_Vpa        KKLFWLTGFLAFVISPIADNLTTALLMCAVVMKVSGDNPRFVNLACINIVIAANAGGAFS
Vch             HTLFWITGWLAFFISPIADNLTTALLMCAVVMKVGGENPKFVSLACINIVIAANAGGAFS
Msp             RKLFWLTGILAFFISPVADNLTTALLMCAVIMAVGRDNGKFVTLACINIVVGANAGGAFS
Mde1            KSLFWLTGFLAFFISPVADNLTTALIMCAVIMAVGKDKPQFIAIGCVNIVVATNAGGAFS
Rsp             RSLFLLTGALSFFLSGILDNLTTALVMGTVVMALGSHSPRFVTIGCISIVVAANAGGAFT
Mde2            RKLVLLVGSFALLLSMICDNVTATLVSIGLVQAFKLSVQDRLKLIVL-VVFAVNSGGVSL
Rpa             WKGPVVLLGLVFVLSSFLDNIAAALIGGMVARHVFRGRVHIGYLAAI--VAASNAGGSGS
                         . :.:*   **::: ::   :   .         :  :  * . *:**   

Cmu             PLGDVTTTMLWINDKISTAGIITSLFLPSVVCVVVAGVCGQLLLKKRRCSGLLEDLDS-E
Ctr             PLGDVTTTMLWINDKISTSGIITTLFLPSVVCVVIAGICGQLLLKKRRCSGLSEDLDR-E
Cpn             PLGDVTTTMLWINNKITSWGIIRALFVPSLVCVLVAGFCGQFFLRKRGSTLIAKDVEL-Q
Ath1            PIGDVTTTMLWIHGQISTLPTMKDLFLPSVVSLAVPLALMSLTSEVNGKEQDPKDVLASE
NhaD_Vpa        PFGDITTLMVWQAGHVRFSEFMP-LFVPSLINYVVPAFLMALFVPNTKPNTI-HEHVE--
Vch             PFGDITTLMVWQAGHVSFLEFMD-LFLPSLANYLVPALVMSLFVPHQTPSSI-QEVVE--
Msp             PFGDITTLMVWQKGVVGFGEFFQ-LFLPSVTNFLVPALIMHFAVPNLKPASS-NEVIL--
Mde1            PFGDITTLMVWRKGIIEFFTFFN-LLLPSLVNFVIPAAIMHLALPSGQPAVVEDEPEQ--
Rsp             PFGDITTLMVWQKGRLDFFEFFA-ILIPSLVNWAVPAAILFFAVPKGTPDAQ-AETIR--
Mde2            ITGDVTTLMVFMRGHVTMLELIS-LMVPSFLSVVLLAALFSVRAKGRVANDV--EIKP--
Rpa             VVGDTTTTMMWIAGVSPLSVLEA--YVAAVIALALFAVPASIQQQKFSP------IVK--
                  ** ** *::  .            :.:.    :      .                  

Cmu             PALPKSNLIAFVGFGSLLMVPMWKAVLGVPPFIGALLGLGLVWLVSDWIHSPHGEG----
Ctr             PALPKSNLIACVGFGSLLMVPMWKAVLGVPPFMGALLGLGLVWLVSDWIHSPHGEG----
Cpn             SAPPKSLWIIFIGLGSLLMVPVWKACLGLPPFMGALLGLGLVWLTSDWIHSPHGED----
Ath1            KMAPRGKLVFGVGLGALVFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESE-----
NhaD_Vpa        -LKRGARRIVLLFVLTIATAVSFHAVLHFPPVVGMMMGLAYLQFFGYFLRKTLKHSLAKK
Vch             -LKRGAKRIVVLFLFTILSAIGFHAFFHFPPVIGMMMGLAYLQFFGYFLRKTLARSLAKK
Msp             -IKRGGRRIVGLFLLTILTAVSFHSVLELPPVAGMMTGLAYLKIFSYYLNRTMNRGRKGQ
Mde1            -MKTGGLVIVGLFILTIVTAVSFHNFLHLPPVFGMMTGLAYLKLFGYYLRKKVRSQFDHS
Rsp             -AKPGALGVAILFAATIVTAVSFKNFLNLPPALGMMLGLGYLQLWSYVLKQKGTRWRDDD
Mde2            -FETLDLVIAALFFSTIISTMLFNFFFSIPPVLTFLFGLSIMFLIGGVVHTHN-------
Rpa             -NAPKGLQIEWVRVGIVAAILIAALAANVTANMKFPALLDHAPVLGLTVWAVIL------
                        :  :    :           ...       *    .    :           

Cmu             ------------------RNHLRMPHILTRIDISSVTFFIGILLAVNALAYSHVLQDLSV
Ctr             ------------------RNHLRMPHILTRIDISSVTFFIGILLAVNALTYSHVLRDLSV
Cpn             ------------------RYHLRVPHILTKIDISSITFFIGILLAVNALSFANLLTDFSL
Ath1            ------------------RQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIAN
NhaD_Vpa        AAMAIANGDDHALKRLGSVVPFDVFHRVSRAEWDTLLFFYGVVMCVGGLSLLGYLELVSN
Vch             TAIAMAKNDEAALKRIGSVVPFDVFRSISHAEWDTLLFFYGVVMCVGGLSLLGYLGLVSE
Msp             GLAGEPE--------AEEETYFDVFQKIARAEWDTLMFFYGVIMCVGGLGFIGYLTMLSH
Mde1            DMPTNHK----------IEDDFDIFDKIAKAEWDTLFFFYGVILAVGGLGFIGYLGMTSA
Rsp             -------------------MVLDSFHQIQRVEWDTLLFFFGIIFAVGGLGVLGYLTLASE
Mde2            -------------------EQVKLLQYIRQIEFDTLLFFLGILLIVGVLKEIGVLTSVAA
Rpa             -----------------------ITAPLRRPDWELMPATFKGTIFLLALVTAASLMPVEE
                                           : : : .         : :  *     *     

Cmu             SMDAVFS-RNTLAILLGLVSSVLDNVPLVAATIGMYDLP---MNDPLWKLIAYAAGTGGS
Ctr             SMDALFS-RNTLAVLLGLVSSVLDNVPLVAATIGMYDLP---MNDPLWKLIAYTAGTGGS
Cpn             WMDKIFS-RNVVAIVIGLLSSVLDNVPLVAATMGMYTLP---LDDTLWKLIAYAAGTGGS
Ath1            YLDANIPNVELIASAIGVVSAIIDNVPLVAATMGMYDLTSFPQDSEFWQLIAFCAGTGGS
NhaD_Vpa        VMYTQWN-PVWANVMVGVLSAIVDNIPVMFAVLTMDPSM----STGNWLLVTLTAGVGGS
Vch             ILYTEWN-PIWANVLVGLLSSVVDNIPVMFAVLSMQPEM----SLGNWLLVTLTAGVGGS
Msp             QMYGGMG-PTMANVLVGVLSAVIDTRCSSFLRLTSEGKR----AAVSSRRTLDQDSIETL
Mde1            FMYGELG-PTTANILVGVMSAIVDNIPVMFAVLTMNPAM----NETQWLLVTLTAGVGGS
Rsp             LLYTDLG-PTAANIIIGALSAIVDNIPLMFAVLTMDPAM----SHGEWLLITLTCGVGGS
Mde2            IYS-QSN-PDWANYIVGLGSALLDNVPLTAALLKAEPSL----TVAQWLTLTYAVGVGGS
Rpa             LPAASWQ----TALGLGFVSAGFDNIPLTALALKQGGYD--------WGFLAYAVGFGGS
                               :*  *: .*.       :                      .    

Cmu             ILIIGSAAGVAYMGMEK-VSFGWYVKHASWIALISYFGGLAVYFLMENFMGLFA------
Ctr             ILIIGSAAGVAYMGMEK-VSFGWYVKHASWIALASYFGGLAVYFLMENCVSLFV------
Cpn             ILIIGSAAGVAFMGLEK-VDFLWYFKRISWIALASYFGGLFSYFVLESLNFFI-------
Ath1            MLVIGSAAGVAFMGMEK-VDFFWYFRKVSGFAFAGYAAGIAAYLAVHNLHFEIPTTVAQI
NhaD_Vpa        LLSIGSAAGVALMGAARGQYTFFGHLKWTPVIALGYAPVLPLICG---------------
Vch             LLSIGSAAGVALMGAAHGKYTFLSHLKWTPVILLGYVVSIVLHLLLNH------------
Msp             HYLTGWPAAPALFYTFLQG-----------------------------------------
Mde1            LLSIGSAAGVALMGQARGFYTFFSHLKWTPAIALGYGASIWVHFLINS------------
Rsp             MLAIGSAAGVALMGQAKGAYTFMAHLKWTWAIALGYFASIGAHLVINAHHF---------
Mde2            VLVIGSAAGIIAMSKEK-ALTFVAYLKFFPYLLVAYTAGYLMTLFMSKAFF---------
Rpa             MMWFGSSAGVAITNMFPEGKSVVMWLRHGWHVGVAYFIAFFAMLLLVGWHPDLPR-----
                    * .*.                                                   

Cmu             ------
Ctr             ------
Cpn             ------
Ath1            PFLTGS
NhaD_Vpa        ------
Vch             ------
Msp             ------
Mde1            ------
Rsp             ------
Mde2            ------
Rpa             ------